Plant GARDEN How To ▶︎

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Nicotiana tabacum

CDS Sequence

CDS ID

lcl|NW_015922501.1_cds_XP_016471249.1_63613

CDS Infomation

[gene=LOC107793419] [db_xref=GeneID:107793419] [protein=nuclear pore complex protein NUP1-like] [protein_id=XP_016471249.1] [location=join(47139..47415,49804..49850,50133..50237,50297..50302,50936..51067,51164..51466,51550..51636,51732..52397,53894..54276,55994..58250)] [gbkey=CDS]

Sequence

ATGGCGGCGGCTGGCAGCGGCGGAACGACAACTTCCTCAGCCTACGAAGGCACCGGAGGC
GGAGCAGGAGGAAAGTTCCGGAAACGACCTTTCCTTAAGAAACAAACTACTCCATACGAT
CGCCCTCCGACGGCTCTCCGGAACCCTAGTTGGCTCACGAAACTCTTCGTTGATCCCGCC
ACTAAGCTCATCACTTCCGGTGCTCAACGGTTCTTTTCGTCGCTCTTTCGGAAACGTCTT
CTCCCTGCCCCAACGCCGTTACCACTTCCTCCTCCAGAAGCAAGACAAGAACCAGTGGAT
CTGCAGCAGGAGTCTTGTCCTAATGATCATGCTGGAGCAGTAGTAGTCACCGGACATGAA
ATTTGCAACTCTGAGGGCAGTGCATTCTCAGAGCTTGAGCAACTGTTAAAACAGAAGACA
TTCACCAGGGTTTCGAAACTTAACCCCCNAGCTGAATCCATTCAATATAGGCCTGTAGCC
AATTATTCTAGCTCTTTACTTGAAAAAAATAGGGCTGAGAAGGTTACATCTGATGCAGCT
GTTGGTACTCCTGCCACAAGTTCGAGGGTCCCTAAAGGCGATGTTGCATCTCCTGCTGAA
CTGGCAAAAGTTTACATGGATACTATGCCTTCAAAGATGTCATCATCAATTCTGAGTTCG
CAAAGTCAAGTTGTGAGAGTAGATACACCACTGCTAAAGAATATAGCATATTCCCAAAAT
TTACCTATTACATCAGTGACAACAAAGACTGCTGGTCTTGTTGGGGTTCGAGCAAATGGA
TTTACCACTCCAAGATCTCGTGGTAGATCTGCAATATACAACATGGCGCGCGCTCCATAC
TCCAGAATTCGTCAAACTGATGGTCAAATGGCTAGTAGCTCCACATACAATGCATATAGC
AGGCCTTCTTTATCTGAGTCAGTCTTGGAGCATGATGGATATTTTGGCTCTAAACAGCCA
CTCAAACGGAGAAGTTCTGTTCTAGAAGATGATCTGGGATCTGTTGGCCCCATGCGGAGG
ACTCGACAGAAACCCAATCTCCTATCAAATGGAGTTTCTCGTCCTAGTCCAGGAGCAGGG
GTTGCTTCTTCTTCTGTCGTTTATCAGGAGGTCTCGAAAGTTGTTGGAGATAACAATGTG
CCGACAAGGTATGCCCACATTCCTTCCAAGTCCAGTGAGACATCTGCGAAGATATTGGAT
CATCTTGAATATCTGACCCCAAAGGAGACGTCATCAGAATCAAAACAAGTTGCAGGGAAA
GATAAAACACCCAAGAAATTGACACAGAACATGCTTCATGGACAAGCTCTTAAAAGCTTG
GAGTCTTTGGATTCGCCGAAGCTGCTTCATATTGCACAAGACAACAGCCATAAGCTGGAA
AATTTGTCTAAGGTTTTTCCAACTGATGCCCATGATTCTAGTTTGCAGAAGCAAGGCAAA
ATAGAACAAAATGGGCAAAGGATATCTATTAGCGAGTCCACCGTTTTACGAAAGAATGAT
GCAAAATGTTCACTTGAAGATGCTCAACATGCTCAGCTAGTTTTGGAAAATGCTGATTCC
CTGGATAAAATGTCTGCAGCTCAACCTCAAAAAAAGCAAGCTTTTAGGATGACCGCACAT
GAGGACTTTTTTGAGCTGGACGAGGACATAAACTTTGATGAGTCTGCATCTCAAGTGGCT
GAAGGGAGAGATAAGATGGGTACATCTGATGCTGAAAAGAAGTCTCTATCTACTGATGGA
GCCCTGAACAAACCTGCAGCTTTTATTGAAACGAAGGCTACTCTGGGGATTTTGAACAAA
AGAAATGATATGGAGGCTCCTGATGCTGCTGTTATCAGCGTCGATAGCACCAGTTTCCTG
CCCAGTGCCAATTCCCTGTCACCCGAGGTTGTCCCGCCATCATTTGGGTCTAACAAATCA
AAAGAGCCAAGTGTTGATAAGGTCCCAGCACTTCTATTTTCATCGTCACCCCCACTCACA
GGGTTAGAGCCAGAAAGCTCTAGCAGCTTATGCAACCCTCCTTTTGGCCTGGCAAGTGGT
CCGTTGGAACTCTTCGAGTCAGATAACTCACAGAAGCATGGAAAGAGCAATGGAAAGTTG
GAAACTTTATCATCTGGTCTATCACCTTCAACTTCATTTGCTGCTCCATCAAGTGCTTCT
AGCTTCAGTAATGGACAGTTTGCACCTAGTCCTGCTATCTCAGCCACCTCCCTCTTGGCA
TCAAGGAATGTCCCAAAGGATGTTCAATCTGGTAGCTCAAGCGAGGGTGCCCCTTCCACA
AGCATTTCAACTGCTGTTGGCAGCACAGCAGGCAACTCCATTACCTCAGGTAGCTGCCTG
TTTAGTTCCGCTGCAGCATCTTCAGTATCAACTGAACCTCCTATCAAATTTGGGCTGTCT
GAAGATCCACCAACAGTGTCGACGCTATCAACAACTTCCAGTGCAGACAATGCAAACTTG
AAAACCAAAGCAACTAATTTTGGCAACTTGAGTAGCACTTCATCTTTTGCGGGCTCATCA
TTTGCATCTACAAGTCCTGGAAATAATATTTTAGGTTTTAGTTCACCAGGAATGTCAACA
GATAATACAGCTAGTATCCAGTCTCAGAGTTCTGTTTCGCTTGTTAGTGCTCGAACTTCT
CTAGCTGGATCAGACAATGCCAAAGTCTCACAGACTGTTCCTTCTCATTTTTTATCATCT
ACTTCATCACCAGAAGTTAGAAACTCTGGAATGACATCTTTCTCCACAGTTGGTTCTGCT
TCCAGTAATACTGGCATAGTTTCTGCTGCTTCTTCAGATGGCAACCCAGCTGGCACCAGC
ACTGCTCAATCTGGAAAATTTAGTATTCTGGCAAGTTCCCCAGCCTCATCTACATTGGGC
AATTCAGTCGGTCCTAGCAGTGAGACCACTCAGCTGGCATTTACTTATGGTGCTAGTCCT
GCAGCAGTAACCACTGCACTTGCCACTTCCAGCAATGCTACTTCTGGTGTATTTATGTTT
GGTGTTAATTCTTCATCTTCCTCGATAAACGCCGTCGACACCTCTACTCGTTCTAGTCCT
GGCACATTTAATTTTGGTGGTAGTTCTTCAGCTTCCTTATTGAACAATGTCAGCACGTCT
AATGGCGCTACTCCTGGTGTATTTAGTTTTGGTGGTGGTTCTTCAGCTTCCTCAGCAAAT
ACTATCAGCACCTCCGCTAGTGCTACTCCTGGCGTATTTAGTTTTGGTGGTGGTTCTTCA
GCTTCCTCAACAAATACTGTCAGCACCTCCACTGGCGCTACTCCTGGCGTATTTAGTTTT
GGTGGTAGTTCTTCAGCTTCCTCAAATTCTGTCAGCACCTCCACTAGTGTTACTCCTGGC
GTATTTGGTTTTGGTGGTAGTTCTTCAGCTTCCTCAGCAAATACTGTCAGCACCTCCACT
GGTGCTACTCCTGGCGTATTTAGTTTTGGTGGTAGTTCTTCTGCTTCCTCAACTAATGCT
GTCAGCACCTCCACTAGTGCTACCACAGGCATATTTAGTTTTGGTGGTAGTTCTTCAGCT
TCCTTAACAGATGTCATCAAGGCCTCAACTACTGCATCTCCTGGCGTATTTAGTTTCGGT
GGTAGCTCTTCAGTTCCATCAACAAATGCCGTCAATGCTAGCAGCACAGTGAGTCCTAAT
CCATTTGCTTTTGGAGCCACTTCTGCCTCTTCACAAACTTCCAGTAGTGCTGGAATTTTT
GGTTCCAGTTTACAGCCCCCAAAGCTTCAACCAGGTTTTAGTTTTAGTTCTAGCACCCCT
ACTGGGTTTACATTTGGAGCATCTTCGTCTTTTAATGCTCCAAGCACTACTGCAGTAGTC
TTTGGATCAGCACCCAGTACCCCTAGTGCACCAGCCTTTCCATTTGGTTCAACTTCTCCG
ACAGTATCATCTTCGCAGCCCATATTTGGGAACTCCAATCCTTTTACTGCGCCCCCCATG
AACAATGGACAGATGAGCATGGAAGACAGCATGGCTGAGGATCCTGCACATGCATCTCCC
CCTGCAATTTCATTTGGTCAACCTTCTGTCTCGCCCTCTCCAGGTGGTTTCATGTTTGGT
TCAACGCCTAGTCCATTCCAGTTTGGTGGTCAGCAGAGTAATGCTGCTGCTCAGAATCCA
TCTCCATTTGCAGCATCCAACAGTTTTGGTGCTGGAGGGAGTTTCTCATTGGGAAGCAGT
GGTCCCGACAAATCAGGTCGAAGGATCATCAAACCTAATAGAAATAAGAATAGAAGGAAG
TAA

Peptide Sequence

PEP ID

XP_016471249.1

PEP Infomation

PREDICTED: nuclear pore complex protein NUP1-like [Nicotiana tabacum]

Sequence

MAAAGSGGTTTSSAYEGTGGGAGGKFRKRPFLKKQTTPYDRPPTALRNPSWLTKLFVDPA
TKLITSGAQRFFSSLFRKRLLPAPTPLPLPPPEARQEPVDLQQESCPNDHAGAVVVTGHE
ICNSEGSAFSELEQLLKQKTFTRVSKLNPXAESIQYRPVANYSSSLLEKNRAEKVTSDAA
VGTPATSSRVPKGDVASPAELAKVYMDTMPSKMSSSILSSQSQVVRVDTPLLKNIAYSQN
LPITSVTTKTAGLVGVRANGFTTPRSRGRSAIYNMARAPYSRIRQTDGQMASSSTYNAYS
RPSLSESVLEHDGYFGSKQPLKRRSSVLEDDLGSVGPMRRTRQKPNLLSNGVSRPSPGAG
VASSSVVYQEVSKVVGDNNVPTRYAHIPSKSSETSAKILDHLEYLTPKETSSESKQVAGK
DKTPKKLTQNMLHGQALKSLESLDSPKLLHIAQDNSHKLENLSKVFPTDAHDSSLQKQGK
IEQNGQRISISESTVLRKNDAKCSLEDAQHAQLVLENADSLDKMSAAQPQKKQAFRMTAH
EDFFELDEDINFDESASQVAEGRDKMGTSDAEKKSLSTDGALNKPAAFIETKATLGILNK
RNDMEAPDAAVISVDSTSFLPSANSLSPEVVPPSFGSNKSKEPSVDKVPALLFSSSPPLT
GLEPESSSSLCNPPFGLASGPLELFESDNSQKHGKSNGKLETLSSGLSPSTSFAAPSSAS
SFSNGQFAPSPAISATSLLASRNVPKDVQSGSSSEGAPSTSISTAVGSTAGNSITSGSCL
FSSAAASSVSTEPPIKFGLSEDPPTVSTLSTTSSADNANLKTKATNFGNLSSTSSFAGSS
FASTSPGNNILGFSSPGMSTDNTASIQSQSSVSLVSARTSLAGSDNAKVSQTVPSHFLSS
TSSPEVRNSGMTSFSTVGSASSNTGIVSAASSDGNPAGTSTAQSGKFSILASSPASSTLG
NSVGPSSETTQLAFTYGASPAAVTTALATSSNATSGVFMFGVNSSSSSINAVDTSTRSSP
GTFNFGGSSSASLLNNVSTSNGATPGVFSFGGGSSASSANTISTSASATPGVFSFGGGSS
ASSTNTVSTSTGATPGVFSFGGSSSASSNSVSTSTSVTPGVFGFGGSSSASSANTVSTST
GATPGVFSFGGSSSASSTNAVSTSTSATTGIFSFGGSSSASLTDVIKASTTASPGVFSFG
GSSSVPSTNAVNASSTVSPNPFAFGATSASSQTSSSAGIFGSSLQPPKLQPGFSFSSSTP
TGFTFGASSSFNAPSTTAVVFGSAPSTPSAPAFPFGSTSPTVSSSQPIFGNSNPFTAPPM
NNGQMSMEDSMAEDPAHASPPAISFGQPSVSPSPGGFMFGSTPSPFQFGGQQSNAAAQNP
SPFAASNSFGAGGSFSLGSSGPDKSGRRIIKPNRNKNRRK

Transcript Sequence

Gene sequence data has not been registered.